allenpvc

DOI: 10.18129/B9.bioc.allenpvc    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This is the development version of allenpvc; to use it, please install the devel version of Bioconductor.

GEO accession data GSE71585 as a SingleCellExperiment

Bioconductor version: Development (3.10)

Celular taxonomy of the primary visual cortex in adult mice based on single cell RNA-sequencing from a study performed by the Allen Institute for Brain Science. In said study 49 transcriptomic cell types are identified.

Author: Diogo P. P. Branco

Maintainer: Diogo P. P. Branco <diogo.pp.branco at gmail.com>

Citation (from within R, enter citation("allenpvc")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("allenpvc")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("allenpvc")

 

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PDF   Reference Manual

Details

biocViews ExperimentData, ExpressionData, RNASeqData, SingleCellData
Version 1.3.1
License CC0
Depends R (>= 3.5.0), AnnotationHub, ExperimentHub(>= 1.7.0), SingleCellExperiment
Imports
LinkingTo
Suggests BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package allenpvc_1.3.1.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/allenpvc
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/allenpvc
Package Short Url http://bioconductor.org/packages/allenpvc/
Package Downloads Report Download Stats

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