a159ccb0042d6de10c4ed83fcbc51a79 *DESCRIPTION
02e13c98c5099df7acb9b8288264f656 *NAMESPACE
bf216acb522701035f735d6f69e53336 *NEWS
47770cdd5567526841982bae0b090b4a *R/assoc_aggregate.r
cc7902b6849137caee28ff74103212cd *R/assoc_single.r
828e9d34fccd27d8ae29a59c30d7bf73 *R/saige_fitnull.r
e460e94100be82edb966535925d5d17c *R/saige_grm.r
ae87f3b0943e896ceb93a94e3e0d95f7 *R/saige_main.r
e6c1f9b7f7f18732eb202f5e3db8fc9d *README.md
b8c8b983540c2c2c7eda3b6f96dfe747 *build/vignette.rds
c46066fc27994677b53f4b95f4dd1c74 *inst/CITATION
5bdbdd0ec2481f0b607c7653eec304b6 *inst/doc/SAIGEgds.R
098378e1c0d5191a1d7e03b340f8aeb2 *inst/doc/SAIGEgds.Rmd
a4e8e98f1d2d658c22f53edd338b8592 *inst/doc/SAIGEgds.html
f73abdcdb92c98ab3dbb6ca8b66fe6ba *inst/extdata/assoc_100snp.gds
941b925ee2140ab8511b326614fb5493 *inst/extdata/grm1k_10k_snp.gds
e45109876e46dae0422bbea14fcc7cbe *inst/extdata/grm1k_10k_sp_grm.rds
5e1f18005f80efafdf98fb0678101b61 *inst/extdata/pheno.txt.gz
6733358cef679f5bbcb0ff679f5a2582 *inst/extdata/v_glmm.rds
19d289cc1ab32ad5ac96a04b4f78f20b *inst/unitTests/saige_model.rds
c8aeaf98981dc357f2d006bb71e31ace *inst/unitTests/saige_model_quant.rds
998d467e41bc257e2ff6f9d138c4d4f6 *inst/unitTests/saige_pval.rds
731fef942fded037ac2d42313e781985 *inst/unitTests/saige_pval_quant.rds
1b0efd345ddbdac2e370d67162c63ea7 *inst/unitTests/test_SAIGE.R
9c95b6c99854db00ce9d39cb4f2597fe *man/SAIGEgds-package.Rd
243186f3978a0b260410a0cdd7324f96 *man/glmmHeritability.Rd
e74cb3911071ad5d2eab1d2879b7b41f *man/pACAT.Rd
6d6b025d723d54abebe0743f36382fa5 *man/seqAssocGLMM_ACAT_O.Rd
d0f8537de5b179977f4d16b243113a20 *man/seqAssocGLMM_ACAT_V.Rd
783fed5ddec9662da6d2f2bcd175df14 *man/seqAssocGLMM_Burden.Rd
bbac1206e937793418b11801541d0e15 *man/seqAssocGLMM_SKAT.Rd
ab345bac2979fdc0257c411ac853edd8 *man/seqAssocGLMM_SPA.Rd
f54ae7bf1a3d58e73b8e19c7529bac3e *man/seqFitNullGLMM_SPA.Rd
18f5f660f052b7e81710b357d630779c *man/seqFitSparseGRM.Rd
7624231dec0157ef8a141cb7867f4481 *man/seqSAIGE_LoadPval.Rd
a7f86562814dfdfbc8464cbb7b5fd583 *man/seqseqFitLDpruning.Rd
bc256b4cd004ac22842799f07c16d150 *src/Makevars
f6f51b566544fbb9b619930831dff8b6 *src/Makevars.win
011c3ec22d15f7fe74fea18831e3f9a2 *src/SPATest.cpp
087a93a5f62e2549c7c215fa115c47d8 *src/saige.h
444e67505d80d957356f6a30b90e7051 *src/saige_fitnull.cpp
0bf5f44e096735b4f0432694bb8dfcdf *src/saige_main.cpp
4bb682a5e80d5db32fb7de5766020bb3 *src/saige_misc.cpp
88b403ff0e6e63fafff7c572ac36bcdb *src/saige_permu.cpp
ed785f524d72f726c29b4d35cd3ef0d0 *src/vec_ext.h
1d2ae132f8ede5a6cffa88ae01201a37 *src/vec_ext_avx2.cpp
e742102398afd23283287f4ab831e62b *src/vec_ext_avx512bw.cpp
e33b525ade13645be41ed26353579417 *src/vec_ext_def.cpp
f3defeeace56ff47b6ccce4eb94ac09d *src/vectorization.cpp
fa2cfd6d21515d01ae7f296287f538cc *src/vectorization.h
459bd429c2116a7f4cf6943fd5396df1 *tests/runTests.R
098378e1c0d5191a1d7e03b340f8aeb2 *vignettes/SAIGEgds.Rmd
