DOI: 10.18129/B9.bioc.HCABrowser    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This is the development version of HCABrowser; for the stable release version, see HCABrowser.

Browse the Human Cell Atlas data portal

Bioconductor version: Development (3.13)

Search, browse, reference, and download resources from the Human Cell Atlas data portal. Development of this package is supported through funds from the Chan / Zuckerberg initiative.

Author: Daniel Van Twisk <Daniel.VanTwisk at RoswellPark.org>, Martin Morgan <Martin.Morgan at RoswellPark.org>, Bioconductor Package Maintainer <maintainer at bioconductor.org>

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("HCABrowser")):


To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


PDF   Reference Manual


biocViews DataImport, Sequencing, SingleCell, Software
Version 1.7.4
In Bioconductor since BioC 3.9 (R-3.6) (2 years)
License Artistic-2.0
Depends R (>= 3.6.0), dplyr, AnVIL
Imports utils, methods, tibble, BiocFileCache, googleAuthR, httr, jsonlite, readr, rlang
Suggests BiocStyle, knitr, rmarkdown, stringr, testthat
URL https://github.com/Bioconductor/HCABrowser
BugReports https://github.com/Bioconductor/HCABrowser/issues
Depends On Me
Imports Me
Suggests Me HCAMatrixBrowser
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/HCABrowser
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HCABrowser
Package Short Url https://bioconductor.org/packages/HCABrowser/
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