VEP run statistics
| VEP version (API) | 86 (86) |
| Cache/Database | /home/kruealbr/.vep/homo_sapiens/86_GRCh37 |
| Species | homo_sapiens |
| Command line options | --cache --offline --everything --fork 2 --assembly GRCh37 --plugin CADD -i ADH1B.vcf.gz --vcf -o chr4.phase3_integrated.vcf --force_overwrite |
| Start time | 2016-11-08 12:38:48 |
| End time | 2016-11-08 12:38:51 |
| Run time | 3 seconds |
| Input file (format) | ADH1B.vcf.gz (VCF) |
| Output file | chr4.phase3_integrated.vcf [text] |
General statistics
| Lines of input read | 644 |
| Variants processed | 389 |
| Variants remaining after filtering | 389 |
| Lines of output written | 389 |
| Novel / existing variants | 2 (0.5%) / 387 (99.5%) |
| Overlapped genes | 2 |
| Overlapped transcripts | 7 |
| Overlapped regulatory features | 3 |