| abs2ratio | Convert log-values to log-ratios | 
| fruitfly | Drosophila microarray time course data in Tomancak et al. (2002) | 
| LargeDataObject-class | Microarray Time Course Object- class | 
| MArrayTC-class | Microarray Time Course Object- class | 
| matrix.cov | Covariance | 
| mb.1D | Multivariate Empirical Bayes Statistics for Longitudinal Replicated Developmental Microarray Time Course Data | 
| mb.2D | Multivariate Empirical Bayes Statistics for Longitudinal Replicated Developmental Microarray Time Course Data | 
| mb.long | Multivariate Empirical Bayes Statistics for Longitudinal Replicated Developmental Microarray Time Course Data | 
| mb.MANOVA | Multivariate Empirical Bayes Analysis of Variance for Longitudinal Replicated Developmental Microarray Time Course Data | 
| mb.paired | Multivariate Empirical Bayes Statistics for Longitudinal Replicated Developmental Microarray Time Course Data | 
| ot.helmert | Helmert orthogonal transformation | 
| plotProfile | Gene Temporal Profile Plot | 
| univ.func | Univariate Data |