DOI: 10.18129/B9.bioc.HCAExplorer    

This is the development version of HCAExplorer; for the stable release version, see HCAExplorer.

Browse the Human Cell Atlas data portal

Bioconductor version: Development (3.11)

Search, browse, reference, and download resources from the Human Cell Atlas data portal. Development of this package is supported through funds from the Chan / Zuckerberg initiative.

Author: Daniel Van Twisk [aut], Martin Morgan [aut], Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("HCAExplorer")):


To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script HCAExplorer
PDF   Reference Manual


biocViews DataImport, Sequencing, Software
Version 1.1.0
In Bioconductor since BioC 3.10 (R-3.6) (< 6 months)
License Artistic-2.0
Depends R (>= 3.6.0), dplyr
Imports S4Vectors, vctrs, curl, httr, jsonlite, methods, plyr, rlang, tibble, tidygraph, utils
Suggests BiocStyle, knitr, rmarkdown, testthat (>= 2.1.0)
URL https://github.com/Bioconductor/HCABrowser
BugReports https://github.com/Bioconductor/HCABrowser/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HCAExplorer_1.1.0.tar.gz
Windows Binary HCAExplorer_1.1.0.zip
Mac OS X 10.11 (El Capitan) HCAExplorer_1.1.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/HCAExplorer
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HCAExplorer
Package Short Url https://bioconductor.org/packages/HCAExplorer/
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