## ---- eval=FALSE--------------------------------------------------------- # library(ozymandias) # data(LAML_multi) # plotX(LAML_multi) ## DNAmethylation-major, as it were # # ## Identify TP53-deleted patients who were not initially flagged as TP53-mutant # # rm(LAML_multi) # gc(,T) ## free up some RAM ## ---- message=FALSE------------------------------------------------------ data(AOCS_450k) ## DNA methylation with SNPs and copy number data(AOCS_miRNA_RNAseq) ## as the title suggests, various sizes of RNA ## match samples & runs via some trickery... rm(AOCS_450k) rm(AOCS_miRNA_RNAseq) gc(,T) ## free up some RAM ## ------------------------------------------------------------------------ data(gbm) ## DNA methylation with SNPs and copy number ## Somewhat unprincipled pathway analysis within Artemis rm(gbm) gc(,T) ## free up the RAM