Annotations for Drosophila melanogaster genome (FlyBase r5.1)


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Documentation for package `ann.Dmelanogaster.FlyBase.r51' version 0.2.0

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ann.Dmelanogaster.FlyBase.r51 Annotations for Drosophila melanogaster genome (FlyBase r5.1)
CHR_SHORTNAMES Constants defined in the ann.Dmelanogaster.FlyBase.r51 package
EXON2GENE "exonID=>geneID" map for the Drosophila melanogaster genome (UCSC Release dm2)
exonParentFeatures Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1)
exonParentFeatures2L Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1)
exonParentFeatures2R Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1)
exonParentFeatures3L Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1)
exonParentFeatures3R Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1)
exonParentFeatures4 Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1)
exonParentFeaturesM Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1)
exonParentFeaturesX Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1)
exons Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1)
exons2L Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1)
exons2R Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1)
exons3L Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1)
exons3R Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1)
exons4 Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1)
exonsM Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1)
exonsX Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1)
genes Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1)
genes2L Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1)
genes2R Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1)
genes3L Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1)
genes3R Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1)
genes4 Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1)
genesM Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1)
genesX Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1)
GENE_ID2NAMES "geneID=>geneNames" map for the Drosophila melanogaster genome (UCSC Release dm2)
getAnnExonParents Functions used to load the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package
getAnnExons Functions used to load the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package
getAnnGenes Functions used to load the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package
getAnnTable Functions used to load the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package
gff.extract.exon GFF utility functions
gff.extract.exonParentFeatures GFF utility functions
gff.extract.gene GFF utility functions
gff.read GFF utility functions
GFFutils GFF utility functions
makeAnnotations Function used to produce the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package