ann.Dmelanogaster.FlyBase.r51 |
Annotations for Drosophila melanogaster genome (FlyBase r5.1) |
CHR_SHORTNAMES |
Constants defined in the ann.Dmelanogaster.FlyBase.r51 package |
EXON2GENE |
"exonID=>geneID" map for the Drosophila melanogaster genome (UCSC Release dm2) |
exonParentFeatures |
Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1) |
exonParentFeatures2L |
Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1) |
exonParentFeatures2R |
Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1) |
exonParentFeatures3L |
Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1) |
exonParentFeatures3R |
Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1) |
exonParentFeatures4 |
Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1) |
exonParentFeaturesM |
Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1) |
exonParentFeaturesX |
Per-chromosome tables containing all known exon-parent features for the Drosophila melanogaster genome (FlyBase r5.1) |
exons |
Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1) |
exons2L |
Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1) |
exons2R |
Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1) |
exons3L |
Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1) |
exons3R |
Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1) |
exons4 |
Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1) |
exonsM |
Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1) |
exonsX |
Per-chromosome tables containing all known exons for the Drosophila melanogaster genome (FlyBase r5.1) |
genes |
Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1) |
genes2L |
Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1) |
genes2R |
Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1) |
genes3L |
Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1) |
genes3R |
Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1) |
genes4 |
Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1) |
genesM |
Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1) |
genesX |
Per-chromosome tables containing all known genes for the Drosophila melanogaster genome (FlyBase r5.1) |
GENE_ID2NAMES |
"geneID=>geneNames" map for the Drosophila melanogaster genome (UCSC Release dm2) |
getAnnExonParents |
Functions used to load the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package |
getAnnExons |
Functions used to load the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package |
getAnnGenes |
Functions used to load the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package |
getAnnTable |
Functions used to load the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package |
gff.extract.exon |
GFF utility functions |
gff.extract.exonParentFeatures |
GFF utility functions |
gff.extract.gene |
GFF utility functions |
gff.read |
GFF utility functions |
GFFutils |
GFF utility functions |
makeAnnotations |
Function used to produce the annotation datasets provided by the ann.Dmelanogaster.FlyBase.r51 package |