To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("seqCNA.annot")

In most cases, you don't need to download the package archive at all.

seqCNA.annot

Annotation for the copy number analysis of deep sequencing cancer data with seqCNA

Bioconductor version: Release (3.1)

Provides annotation on GC content, mappability and genomic features for various genomes

Author: David Mosen-Ansorena

Maintainer: David Mosen-Ansorena <dmosen.gn at cicbiogune.es>

Citation (from within R, enter citation("seqCNA.annot")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("seqCNA.annot")

Documentation

PDF   Reference Manual

Details

biocViews CopyNumberVariationData, ExperimentData, Genome
Version 1.3.1
License GPL-3
Depends R (>= 2.10)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me seqCNA
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source seqCNA.annot_1.3.1.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
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