To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("msdata")

In most cases, you don't need to download the package archive at all.

msdata

Various Mass Spectrometry raw data example files

Bioconductor version: Release (3.1)

Ion Trap positive ionization mode data in mzData file format. Subset from 500-850 m/z and 1190-1310 seconds, incl. MS2 and MS3, intensity threshold 100.000. Extracts from FTICR Apex III, m/z 400-450. Subset of UPLC - Bruker micrOTOFq data, both mzData, mzML and mz5. PSI mzIdentML example files for various search engines.

Author: Steffen Neumann <sneumann at ipb-halle.de>

Maintainer: Steffen Neumann <sneumann at ipb-halle.de>

Citation (from within R, enter citation("msdata")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("msdata")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, MassSpectrometryData
Version 0.5.0
License GPL (>= 2)
Depends
Imports
LinkingTo
Suggests xcms
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me MSnbase, mzR, RforProteomics, xcms
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source msdata_0.5.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Browse/checkout source (username/password: readonly)
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