affydata

Affymetrix Data for Demonstration Purpose

Bioconductor version: Release (2.14)

Example datasets of a slightly large size. They represent 'real world examples', unlike the artificial examples included in the package affy.

Author: Laurent Gautier <laurent at cbs.dtu.dk>

Maintainer: Harris Jaffee <hj at jhu.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("affydata")

To cite this package in a publication, start R and enter:

    citation("affydata")

Documentation

PDF R Script affydata primer
PDF   Reference Manual

Details

biocViews ExperimentData, Microarray, OneChannel
Version 1.12.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License GPL (>= 2)
Depends R (>= 2.4.0), affy(>= 1.23.4)
Imports methods
Suggests hgu95av2cdf, hgu133acdf
System Requirements
URL
Depends On Me affyContam, RPA
Imports Me
Suggests Me affy, affycoretools, affyPara, affypdnn, affyPLM, affyQCReport, arrayMvout, ArrayTools, bgx, Biostrings, farms, gcrma, LMGene, puma, pvac, RefPlus, sscore, TurboNorm, virtualArray, vsn, yaqcaffy

Package Downloads

Package Source affydata_1.12.0.tar.gz
Windows Binary affydata_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) affydata_1.12.0.tgz
Mac OS X 10.9 (Mavericks) affydata_1.12.0.tgz
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