RnaSeqTutorial

RNA-Seq Tutorial (EBI Cambridge UK, October 2011)

Bioconductor version: Release (2.14)

A selection of RNA-Seq data to get familiar with the related Bioconductor core packages and the easyRNASeq package.

Author: Nicolas Delhomme, Ismael Padioleau

Maintainer: Nicolas Delhomme <nicolas.delhomme at umu.se>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RnaSeqTutorial")

To cite this package in a publication, start R and enter:

    citation("RnaSeqTutorial")

Documentation

PDF R Script RNA-Seq Tutorial
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, RNAseqData
Version 0.2.0
License Artistic-2.0
Depends R (>= 3.0.2), methods, easyRNASeq
Imports
Suggests Rsamtools, ShortRead, BSgenome.Dmelanogaster.UCSC.dm3, GenomicAlignments, biomaRt, genomeIntervals
System Requirements
URL
Depends On Me
Imports Me
Suggests Me easyRNASeq

Package Downloads

Package Source RnaSeqTutorial_0.2.0.tar.gz
Windows Binary RnaSeqTutorial_0.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RnaSeqTutorial_0.2.0.tgz
Mac OS X 10.9 (Mavericks) RnaSeqTutorial_0.2.0.tgz
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