To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("DREAM4")

In most cases, you don't need to download the package archive at all.

DREAM4

Synthetic Expression Data for Gene Regulatory Network Inference from the 2009 DREAM4 challenge

Bioconductor version: Release (3.0)

Simulated expression data for five 10-node, and five 100-node networks, with associated data (including solutions) from the 2009 DREAM4 challenge.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at fhcrc.org>

Citation (from within R, enter citation("DREAM4")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("DREAM4")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DREAM4")

 

PDF R Script DREAM4 Overview
PDF DREAM4_InSilico_Description.pdf
PDF   Reference Manual

Details

biocViews ExperimentData, NetworkInference, RNAExpressionData
Version 1.1.0
License GPL
Depends R (>= 2.15.1), GenomicRanges
Imports BiocGenerics
Suggests RUnit, networkBMA
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source DREAM4_1.1.0.tar.gz
Windows Binary DREAM4_1.1.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) DREAM4_1.1.0.tgz
Mac OS X 10.9 (Mavericks) DREAM4_1.1.0.tgz
Browse/checkout source (username/password: readonly)
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