To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MafDb.ALL.wgs.phase1.release.v3.20101123")

In most cases, you don't need to download the package archive at all.

MafDb.ALL.wgs.phase1.release.v3.20101123

Minimum allele frequency data from the 1000 Genomes project

Bioconductor version: Release (3.0)

This annotation package stores minimum allele frequency data frozen from the 1000 Genomes project

Author: Robert Castelo, Dei M. Elurbe

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.ALL.wgs.phase1.release.v3.20101123")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MafDb.ALL.wgs.phase1.release.v3.20101123")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, Homo_sapiens, MafDb
Version 0.99.1
License Artistic-2.0
Depends R (>= 3.0.0), VariantFiltering
Imports RSQLite (>= 0.8-1), Biobase, AnnotationDbi, IRanges, Biostrings, Rsamtools, GenomicRanges, VariantAnnotation
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me VariantFiltering

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source MafDb.ALL.wgs.phase1.release.v3.20101123_0.99.1.tar.gz
Windows Binary MafDb.ALL.wgs.phase1.release.v3.20101123_0.99.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) MafDb.ALL.wgs.phase1.release.v3.20101123_0.99.1.tgz
Mac OS X 10.9 (Mavericks) MafDb.ALL.wgs.phase1.release.v3.20101123_0.99.1.tgz
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