tscR

DOI: 10.18129/B9.bioc.tscR    

A time series clustering package combining slope and Frechet distances

Bioconductor version: Release (3.12)

Clustering for time series data using slope distance and/or shape distance.

Author: Miriam Riquelme-Pérez and Fernando Pérez-Sanz

Maintainer: Pérez-Sanz, Fernando <fernando.perez8 at um.es>

Citation (from within R, enter citation("tscR")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("tscR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("tscR")

 

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Details

biocViews Clustering, DNAMethylation, GeneExpression, Microarray, Software
Version 1.2.0
In Bioconductor since BioC 3.11 (R-4.0) (0.5 years)
License GPL (>=2)
Depends R (>= 4.0), dplyr
Imports gridExtra, methods, dtw, class, kmlShape, graphics, cluster, RColorBrewer, grDevices, knitr, rmarkdown, prettydoc, grid, ggplot2, latex2exp, stats, SummarizedExperiment, GenomicRanges, IRanges, S4Vectors
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package tscR_1.2.0.tar.gz
Windows Binary tscR_1.1.1.zip
macOS 10.13 (High Sierra) tscR_1.2.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/tscR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/tscR
Package Short Url https://bioconductor.org/packages/tscR/
Package Downloads Report Download Stats

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