plrs

Piecewise Linear Regression Splines (PLRS) for the association between DNA copy number and gene expression

Bioconductor version: Release (2.14)

The present package implements a flexible framework for modeling the relationship between DNA copy number and gene expression data using Piecewise Linear Regression Splines (PLRS).

Author: Gwenael G.R. Leday

Maintainer: Gwenael G.R. Leday to <gleday at few.vu.nl>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("plrs")

To cite this package in a publication, start R and enter:

    citation("plrs")

Documentation

PDF R Script plrs
PDF   Reference Manual

Details

biocViews Regression, Software
Version 1.4.0
In Bioconductor since BioC 2.12 (R-3.0)
License GPL (>=2.0)
Depends R (>= 2.10), Biobase
Imports BiocGenerics, CGHbase, graphics, grDevices, ic.infer, marray, methods, quadprog, Rcsdp, stats, stats4, utils
Suggests mvtnorm, methods
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source plrs_1.4.0.tar.gz
Windows Binary plrs_1.4.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) plrs_1.4.0.tgz
Mac OS X 10.9 (Mavericks)
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