To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("plrs")

In most cases, you don't need to download the package archive at all.

plrs

Piecewise Linear Regression Splines (PLRS) for the association between DNA copy number and gene expression

Bioconductor version: Release (2.14)

The present package implements a flexible framework for modeling the relationship between DNA copy number and gene expression data using Piecewise Linear Regression Splines (PLRS).

Author: Gwenael G.R. Leday

Maintainer: Gwenael G.R. Leday to <gleday at few.vu.nl>

Citation (from within R, enter citation("plrs")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("plrs")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("plrs")

 

PDF R Script plrs
PDF   Reference Manual

Details

biocViews Regression, Software
Version 1.4.0
In Bioconductor since BioC 2.12 (R-3.0)
License GPL (>=2.0)
Depends R (>= 2.10), Biobase
Imports BiocGenerics, CGHbase, graphics, grDevices, ic.infer, marray, methods, quadprog, Rcsdp, stats, stats4, utils
Suggests mvtnorm, methods
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source plrs_1.4.0.tar.gz
Windows Binary plrs_1.4.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) plrs_1.4.0.tgz
Mac OS X 10.9 (Mavericks) plrs_1.4.0.tgz
Browse/checkout source (username/password: readonly)
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