To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("nucleR")

In most cases, you don't need to download the package archive at all.

nucleR

Nucleosome positioning package for R

Bioconductor version: Release (2.14)

Nucleosome positioning for Tiling Arrays and Next Generation Sequencing Experiments

Author: Oscar Flores, David Rossell

Maintainer: Oscar Flores <oflores at mmb.pcb.ub.es>

Citation (from within R, enter citation("nucleR")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("nucleR")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("nucleR")

 

PDF R Script Quick analysis of nucleosome positioning experiments
PDF   Reference Manual
Text   NEWS

Details

biocViews ChIPSeq, Genetics, Microarray, Sequencing, Software
Version 1.12.0
In Bioconductor since BioC 2.9 (R-2.14)
License LGPL (>= 3)
Depends methods, BiocGenerics(>= 0.1.0), IRanges(>= 1.13.5), Biobase(>= 2.15.1), ShortRead, parallel
Imports methods, BiocGenerics, IRanges, Biobase, ShortRead, GenomicRanges, stats
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source nucleR_1.12.0.tar.gz
Windows Binary nucleR_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) nucleR_1.12.0.tgz
Mac OS X 10.9 (Mavericks) nucleR_1.12.0.tgz
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