To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("methylMnM")

In most cases, you don't need to download the package archive at all.

methylMnM

DOI: 10.18129/B9.bioc.methylMnM    

detect different methylation level (DMR)

Bioconductor version: Release (3.5)

To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.

Author: Yan Zhou, Bo Zhang, Nan Lin, BaoXue Zhang and Ting Wang

Maintainer: Yan Zhou<zhouy1016 at 163.com>

Citation (from within R, enter citation("methylMnM")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("methylMnM")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("methylMnM")

 

PDF R Script methylMnM
PDF   Reference Manual

Details

biocViews DNAMethylation, Sequencing, Software
Version 1.14.0
In Bioconductor since BioC 2.13 (R-3.0) (4 years)
License GPL-3
Depends R (>= 2.12.1), edgeR, statmod
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source methylMnM_1.14.0.tar.gz
Windows Binary methylMnM_1.14.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) methylMnM_1.14.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/methylMnM
Package Short Url http://bioconductor.org/packages/methylMnM/
Package Downloads Report Download Stats

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