To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("methylMnM")

In most cases, you don't need to download the package archive at all.

methylMnM

detect different methylation level (DMR)

Bioconductor version: Release (2.14)

To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.

Author: Yan Zhou, Bo Zhang, Nan Lin, BaoXue Zhang and Ting Wang

Maintainer: Yan Zhou<zhouy1016 at 163.com>

Citation (from within R, enter citation("methylMnM")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("methylMnM")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("methylMnM")

 

PDF R Script methylMnM
PDF   Reference Manual

Details

biocViews DNAMethylation, Sequencing, Software
Version 1.2.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL-3
Depends R (>= 2.12.1), edgeR, statmod
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source methylMnM_1.2.0.tar.gz
Windows Binary methylMnM_1.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) methylMnM_1.2.0.tgz
Mac OS X 10.9 (Mavericks) methylMnM_1.2.0.tgz
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