To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mdgsa")

In most cases, you don't need to download the package archive at all.

mdgsa

 

   

Multi Dimensional Gene Set Analysis.

Bioconductor version: Release (3.5)

Functions to preform a Gene Set Analysis in several genomic dimensions. Including methods for miRNAs.

Author: David Montaner <dmontaner at cipf.es>

Maintainer: David Montaner <dmontaner at cipf.es>

Citation (from within R, enter citation("mdgsa")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mdgsa")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mdgsa")

 

PDF R Script mdgsa_vignette
PDF   Reference Manual

Details

biocViews Annotation, GO, GeneSetEnrichment, Pathways, Software
Version 1.8.0
In Bioconductor since BioC 3.1 (R-3.2) (2 years)
License GPL
Depends R (>= 2.14)
Imports AnnotationDbi, DBI, GO.db, KEGG.db, cluster, Matrix
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, limma, ALL, hgu95av2.db, RUnit, BiocGenerics
SystemRequirements
Enhances
URL https://github.com/dmontaner/mdgsa http://www.dmontaner.com
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source mdgsa_1.8.0.tar.gz
Windows Binary mdgsa_1.8.0.zip
Mac OS X 10.11 (El Capitan) mdgsa_1.8.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/mdgsa/tree/release-3.5
Package Short Url http://bioconductor.org/packages/mdgsa/
Package Downloads Report Download Stats

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