DOI: 10.18129/B9.bioc.imageHTS    

Analysis of high-throughput microscopy-based screens

Bioconductor version: Release (3.6)

imageHTS is an R package dedicated to the analysis of high-throughput microscopy-based screens. The package provides a modular and extensible framework to segment cells, extract quantitative cell features, predict cell types and browse screen data through web interfaces. Designed to operate in distributed environments, imageHTS provides a standardized access to remote data and facilitates the dissemination of high-throughput microscopy-based datasets.

Author: Gregoire Pau, Xian Zhang, Michael Boutros, Wolfgang Huber

Maintainer: Joseph Barry <joseph.barry at>

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PDF R Script Analysis of high-throughput microscopy-based screens with imageHTS
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biocViews CellBasedAssays, Preprocessing, Software, Visualization
Version 1.28.1
In Bioconductor since BioC 2.7 (R-2.12) (7.5 years)
License LGPL-2.1
Depends R (>= 2.9.0), EBImage(>= 4.3.12), cellHTS2(>= 2.10.0)
Imports tools, Biobase, hwriter, methods, vsn, stats, utils, e1071
Suggests BiocStyle, MASS
Depends On Me PGPC, phenoDist
Imports Me
Suggests Me
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Source Package imageHTS_1.28.1.tar.gz
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