To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("flowFlowJo")

In most cases, you don't need to download the package archive at all.

flowFlowJo

Tools for extracting information from a FlowJo workspace and working with the data in the flowCore paradigm.

Bioconductor version: Release (3.0)

FlowJo is a commercial GUI based software package from TreeStar Inc. for the visualization and analysis of flow cytometry data. One of the FlowJo standard export file types is the "FlowJo Workspace". This is an XML document that describes files and manipulations that have been performed in the FlowJo GUI environment. This package can take apart the FlowJo workspace and deliver the data into R in the flowCore paradigm.

Author: John J. Gosink <gosinkj at amgen.com>

Maintainer: John J. Gosink <gosinkj at amgen.com>

Citation (from within R, enter citation("flowFlowJo")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("flowFlowJo")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowFlowJo")

 

PDF R Script Basic Functions for working with FlowJo
PDF   Reference Manual

Details

biocViews FlowCytometry, Software
Version 1.24.0
In Bioconductor since BioC 2.4 (R-2.9)
License GPL (>=3)
Depends R (>= 2.5.0), MASS
Imports flowCore, XML (>= 1.96), methods, Biobase
Suggests
System Requirements
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Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source flowFlowJo_1.24.0.tar.gz
Windows Binary flowFlowJo_1.24.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) flowFlowJo_1.24.0.tgz
Mac OS X 10.9 (Mavericks) flowFlowJo_1.24.0.tgz
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