dualKS

Dual KS Discriminant Analysis and Classification

Bioconductor version: Release (2.14)

This package implements a Kolmogorov Smirnov rank-sum based algorithm for training (i.e. discriminant analysis--identification of genes that discriminate between classes) and classification of gene expression data sets. One of the chief strengths of this approach is that it is amenable to the "multiclass" problem. That is, it can discriminate between more than 2 classes.

Author: Eric J. Kort, Yarong Yang

Maintainer: Eric J. Kort <ericjkort at gmail.com>, Yarong Yang <yarong.yang at ndsu.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("dualKS")

To cite this package in a publication, start R and enter:

    citation("dualKS")

Documentation

PDF R Script dualKS.pdf
PDF   Reference Manual

Details

biocViews Classification, Microarray, Software
Version 1.24.0
In Bioconductor since BioC 2.3 (R-2.8)
License LGPL (>= 2.0)
Depends R (>= 2.6.0), Biobase(>= 1.15.0), affy, methods
Imports graphics
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source dualKS_1.24.0.tar.gz
Windows Binary dualKS_1.24.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) dualKS_1.24.0.tgz
Mac OS X 10.9 (Mavericks)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center