affypdnn

Probe Dependent Nearest Neighbours (PDNN) for the affy package

The package contains functions to perform the PDNN method described by Li Zhang et al.

Author H. Bjorn Nielsen and Laurent Gautier (Many thanks to Li Zhang early communications about the existence of the PDNN program and related publications).
Maintainer Laurent Gautier

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("affypdnn")

Vignettes (Documentation)

Package Downloads
affypdnn.pdf
Package source affypdnn_1.16.0.tar.gz
Windows binary affypdnn_1.16.0.zip
MacOS X 10.4 (Tiger) binary affypdnn_1.16.0.tgz
MacOS X 10.5 (Leopard) binary affypdnn_1.16.0.tgz

Details

biocViews
OneChannel , Microarray , Preprocessing
Depends
R , affy
Suggests
affydata , hgu95av2probe
Imports
SystemRequirements
License LGPL
URL
dependsOnMe
suggestsMe