TnT
This is the released version of TnT; for the devel version, see TnT.
All Bioconductor versions of TnT
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6
Interactive Visualization for Genomic Features
Bioconductor version: 3.23 · Package version: 1.34.0
A R interface to the TnT javascript library (https://github.com/ tntvis) to provide interactive and flexible visualization of track-based genomic data.
Author: Jialin Ma [cre, aut], Miguel Pignatelli [aut], Toby Hocking [aut]
Maintainer: Jialin Ma <marlin- at gmx.cn>
DOI: 10.18129/B9.bioc.TnT
Citation
From within R, enter citation("TnT"):
Jialin Ma, Miguel Pignatelli, Toby Hocking. TnT: Interactive Visualization for Genomic Features. doi:10.18129/B9.bioc.TnT, R package version 1.34.0, https://bioconductor.org/packages/TnT.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TnT")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.34.0 |
| License | AGPL-3 |
| URL | https://github.com/Marlin-Na/TnT |
| Bug Reports | https://github.com/Marlin-Na/TnT/issues |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.6 (R-3.4) (8 years) |
| Downloads rank | 1300 of 2,418 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Infrastructure, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/TnT/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TnT")| Introduction to TnT | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | TnT_1.34.0.tar.gz |
| Windows binary (x86_64) | TnT_1.34.0.zip |
| macOS binary (arm64) | TnT_1.34.0.tgz |
| macOS binary (x86_64) | TnT_1.34.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/TnT |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TnT |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.4), GenomicRanges
Imports: methods, stats, utils, grDevices, htmlwidgets, jsonlite, data.table, Biobase, GenomeInfoDb, IRanges, S4Vectors, knitr
Suggests: GenomicFeatures, shiny, BiocManager, rmarkdown, testthat