To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SISPA")

In most cases, you don't need to download the package archive at all.

SISPA

DOI: 10.18129/B9.bioc.SISPA    

SISPA: Method for Sample Integrated Set Profile Analysis

Bioconductor version: Release (3.6)

Sample Integrated Set Profile Analysis (SISPA) is a method designed to define sample groups with similar gene set enrichment profiles.

Author: Bhakti Dwivedi and Jeanne Kowalski

Maintainer: Bhakti Dwivedi <bhakti.dwivedi at emory.edu>

Citation (from within R, enter citation("SISPA")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SISPA")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews GeneSetEnrichment, GenomeWideAssociation, Software
Version 1.8.0
In Bioconductor since BioC 3.2 (R-3.2) (2 years)
License GPL-2
Depends R (>= 3.2), genefilter, GSVA, changepoint
Imports data.table, plyr, ggplot2
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SISPA_1.8.0.tar.gz
Windows Binary SISPA_1.8.0.zip
Mac OS X 10.11 (El Capitan) SISPA_1.8.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SISPA
Package Short Url http://bioconductor.org/packages/SISPA/
Package Downloads Report Download Stats

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