To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RPA")

In most cases, you don't need to download the package archive at all.

RPA

RPA: Robust Probabilistic Averaging for probe-level analysis

Bioconductor version: Release (2.14)

Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays. Lahti et al. "Probabilistic Analysis of Probe Reliability in Differential Gene Expression Studies with Short Oligonucleotide Arrays", TCBB/IEEE, 2011. http://doi.ieeecomputersociety.org/10.1109/TCBB.2009.38

Author: Leo Lahti <leo.lahti at iki.fi>

Maintainer: Leo Lahti <leo.lahti at iki.fi>

Citation (from within R, enter citation("RPA")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RPA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RPA")

 

PDF R Script RPA
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews GeneExpression, Microarray, Preprocessing, QualityControl, Software
Version 1.20.0
In Bioconductor since BioC 2.5 (R-2.10)
License BSD_2_clause + file LICENSE
Depends R (>= 2.15.0), affy, affydata, methods, parallel
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RPA_1.20.0.tar.gz
Windows Binary RPA_1.20.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RPA_1.20.0.tgz
Mac OS X 10.9 (Mavericks) RPA_1.20.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center