To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RDAVIDWebService")

In most cases, you don't need to download the package archive at all.

RDAVIDWebService

An R Package for retrieving data from DAVID into R objects using Web Services API.

Bioconductor version: Release (2.14)

Tools for retrieving data from the Database for Annotation, Visualization and Integrated Discovery (DAVID) using Web Services into R objects. This package offers the main functionalities of DAVID website including: i) user friendly connectivity to upload gene/background list/s, change gene/background position, select current specie/s, select annotations, etc. ii) Reports of the submitted Gene List, Annotation Category Summary, Gene/Term Clusters, Functional Annotation Chart, Functional Annotation Table

Author: Cristobal Fresno and Elmer A. Fernandez

Maintainer: Cristobal Fresno <cfresno at bdmg.com.ar>

To install this package, start R and enter:

Citation (from within R, enter citation("RDAVIDWebService")):

Installation

source("http://bioconductor.org/biocLite.R")
biocLite("RDAVIDWebService")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RDAVIDWebService")

 

PDF R Script RDAVIDWebService: a versatile R interface to DAVID
PDF   Reference Manual
Text   NEWS

Details

biocViews Cancer, DifferentialExpression, ExperimentData, Software, Visualization
Version 1.2.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL (>=2)
Depends R (>= 2.14.1), methods, graph, GOstats, ggplot2
Imports Category, GO.db, RBGL, rJava
Suggests Rgraphviz
System Requirements
URL http://www.bdmg.com.ar http://david.abcc.ncifcrf.gov/
Depends On Me CompGO
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RDAVIDWebService_1.2.0.tar.gz
Windows Binary RDAVIDWebService_1.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RDAVIDWebService_1.2.0.tgz
Mac OS X 10.9 (Mavericks) RDAVIDWebService_1.2.0.tgz
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