To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("NTW")

In most cases, you don't need to download the package archive at all.

NTW

Predict gene network using an Ordinary Differential Equation (ODE) based method

Bioconductor version: Release (2.14)

This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.

Author: Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini

Maintainer: Yuanhua Liu <liuyuanhua at picb.ac.cn>

To install this package, start R and enter:

Citation (from within R, enter citation("NTW")):

Installation

source("http://bioconductor.org/biocLite.R")
biocLite("NTW")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("NTW")

 

PDF R Script NTW vignette
PDF   Reference Manual
Text   NEWS

Details

biocViews Preprocessing, Software
Version 1.14.0
In Bioconductor since BioC 2.7 (R-2.12)
License GPL-2
Depends R (>= 2.3.0)
Imports mvtnorm, stats, utils
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source NTW_1.14.0.tar.gz
Windows Binary NTW_1.14.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) NTW_1.14.0.tgz
Mac OS X 10.9 (Mavericks) NTW_1.14.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center