To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MIMOSA")

In most cases, you don't need to download the package archive at all.

MIMOSA

Mixture Models for Single-Cell Assays

Bioconductor version: Release (2.14)

Modeling count data using Dirichlet-multinomial and beta-binomial mixtures with applications to single-cell assays.

Author: Greg Finak <gfinak at fhcrc.org>

Maintainer: Greg Finak <gfinak at fhcrc.org>

Citation (from within R, enter citation("MIMOSA")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MIMOSA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MIMOSA")

 

PDF R Script MIMOSA: Mixture Models For Single Cell Assays
PDF   Reference Manual
Text   NEWS

Details

biocViews CellBasedAssays, FlowCytometry, Software
Version 1.0.0
In Bioconductor since BioC 2.14 (R-3.1)
License Artistic-2.0
Depends R (>= 3.0.2), MASS, plyr, reshape, Biobase, ggplot2
Imports methods, Formula, data.table, pracma, MCMCpack, coda, modeest, ggplot2, reshape, plyr, Biobase, MASS, testthat, Rcpp
Suggests parallel, knitr
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source MIMOSA_1.0.0.tar.gz
Windows Binary MIMOSA_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) MIMOSA_1.0.0.tgz
Mac OS X 10.9 (Mavericks) MIMOSA_1.0.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center