To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KCsmart")

In most cases, you don't need to download the package archive at all.

KCsmart

 

Multi sample aCGH analysis package using kernel convolution

Bioconductor version: Release (3.1)

Multi sample aCGH analysis package using kernel convolution

Author: Jorma de Ronde, Christiaan Klijn, Arno Velds

Maintainer: Jorma de Ronde <j.d.ronde at nki.nl>

Citation (from within R, enter citation("KCsmart")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("KCsmart")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("KCsmart")

 

PDF R Script KCsmart example session
PDF   Reference Manual

Details

biocViews CopyNumberVariation, Microarray, Software, Visualization, aCGH
Version 2.26.0
In Bioconductor since BioC 2.3 (R-2.8) (6.5 years)
License GPL-3
Depends siggenes, multtest, KernSmooth
Imports methods, BiocGenerics
LinkingTo
Suggests
SystemRequirements
Enhances Biobase, CGHbase
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source KCsmart_2.26.0.tar.gz
Windows Binary KCsmart_2.26.0.zip
Mac OS X 10.6 (Snow Leopard) KCsmart_2.26.0.tgz
Mac OS X 10.9 (Mavericks) KCsmart_2.26.0.tgz
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