To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GGBase")

In most cases, you don't need to download the package archive at all.

GGBase

 

GGBase infrastructure for genetics of gene expression package GGtools

Bioconductor version: Release (3.1)

infrastructure

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("GGBase")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GGBase")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GGBase")

 

PDF R Script GGBase -- infrastructure for GGtools, genetics of gene expression
PDF   Reference Manual
Text   NEWS

Details

biocViews Genetics, Infrastructure, Software
Version 3.30.1
In Bioconductor since BioC 2.2 (R-2.7) (7 years)
License Artistic-2.0
Depends R (>= 2.14), methods, snpStats
Imports limma, genefilter, Biobase, BiocGenerics, Matrix, AnnotationDbi, digest, GenomicRanges
LinkingTo
Suggests GGtools, illuminaHumanv1.db
SystemRequirements
Enhances
URL
Depends On Me ceu1kg, ceu1kgv, ceuhm3, dsQTL, encoDnaseI, GGdata, GGtools, hmyriB36, yri1kgv
Imports Me
Suggests Me ind1KG
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source GGBase_3.30.1.tar.gz
Windows Binary GGBase_3.30.0.zip
Mac OS X 10.6 (Snow Leopard) GGBase_3.30.1.tgz
Mac OS X 10.9 (Mavericks) GGBase_3.30.1.tgz
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