To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CSSP")

In most cases, you don't need to download the package archive at all.

CSSP

ChIP-Seq Statistical Power

Bioconductor version: Release (3.0)

Power computation for ChIP-Seq data based on Bayesian estimation for local poisson counting process.

Author: Chandler Zuo, Sunduz Keles

Maintainer: Chandler Zuo<zuo at stat.wisc.edu>

Citation (from within R, enter citation("CSSP")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CSSP")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CSSP")

 

PDF R Script cssp.pdf
PDF   Reference Manual

Details

biocViews Bayesian, ChIPSeq, QualityControl, Sequencing, Software
Version 1.4.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL-2
Depends
Imports methods, splines, stats, utils
Suggests testthat
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source CSSP_1.4.0.tar.gz
Windows Binary CSSP_1.4.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) CSSP_1.4.0.tgz
Mac OS X 10.9 (Mavericks) CSSP_1.4.0.tgz
Browse/checkout source (username/password: readonly)
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