To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CGHbase")

In most cases, you don't need to download the package archive at all.

CGHbase

CGHbase: Base functions and classes for arrayCGH data analysis.

Bioconductor version: Release (2.14)

Contains functions and classes that are needed by arrayCGH packages.

Author: Sjoerd Vosse, Mark van de Wiel

Maintainer: Mark van de Wiel <mark.vdwiel at vumc.nl>

Citation (from within R, enter citation("CGHbase")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CGHbase")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CGHbase")

 

PDF   Reference Manual

Details

biocViews CopyNumberVariation, Infrastructure, Microarray, Software
Version 1.24.0
In Bioconductor since BioC 2.3 (R-2.8)
License GPL
Depends R (>= 2.10), methods, Biobase(>= 2.5.5), marray
Imports
Suggests
System Requirements
URL
Depends On Me CGHcall, CGHnormaliter, CGHregions, sigaR
Imports Me CGHnormaliter, plrs, QDNAseq
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source CGHbase_1.24.0.tar.gz
Windows Binary CGHbase_1.24.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) CGHbase_1.24.0.tgz
Mac OS X 10.9 (Mavericks) CGHbase_1.24.0.tgz
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