Registration and Call for Abstracts Open for Bioc2024

miRBaseConverter

A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions


Bioconductor version: Release (3.18)

A comprehensive tool for converting and retrieving the miRNA Name, Accession, Sequence, Version, History and Family information in different miRBase versions. It can process a huge number of miRNAs in a short time without other depends.

Author: Taosheng Xu<taosheng.x at gmail.com>, Thuc Le<Thuc.Le at unisa.edu.au>

Maintainer: Taosheng Xu<taosheng.x at gmail.com>

Citation (from within R, enter citation("miRBaseConverter")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("miRBaseConverter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews Software, miRNA
Version 1.26.0
In Bioconductor since BioC 3.6 (R-3.4) (6.5 years)
License GPL (>= 2)
Depends R (>= 3.4)
Imports stats
System Requirements
URL https://github.com/taoshengxu/miRBaseConverter
Bug Reports https://github.com/taoshengxu/miRBaseConverter/issues
See More
Suggests BiocGenerics, RUnit, knitr, rtracklayer, utils, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me SPONGE
Suggests Me EpiMix
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary miRBaseConverter_1.26.0.zip
macOS Binary (x86_64) miRBaseConverter_1.26.0.tgz
macOS Binary (arm64) miRBaseConverter_1.26.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/miRBaseConverter
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/miRBaseConverter
Bioc Package Browser https://code.bioconductor.org/browse/miRBaseConverter/
Package Short Url https://bioconductor.org/packages/miRBaseConverter/
Package Downloads Report Download Stats