## ----------------------------------------------------------------------------- library(mCSEAdata) data(mcseadata) data(bandTable) ## ----------------------------------------------------------------------------- class(betaTest) dim(betaTest) head(betaTest, 3) class(phenoTest) dim(phenoTest) head(phenoTest, 3) class(exprTest) dim(exprTest) head(exprTest, 3) ## ----------------------------------------------------------------------------- class(assocPromoters450k) length(assocPromoters450k) head(assocPromoters450k, 3) class(assocGenes450k) length(assocGenes450k) head(assocGenes450k, 3) class(assocCGI450k) length(assocCGI450k) head(assocCGI450k, 3) class(assocPromotersEPIC) length(assocPromotersEPIC) head(assocPromotersEPIC, 3) class(assocGenesEPIC) length(assocGenesEPIC) head(assocGenesEPIC, 3) class(assocCGIEPIC) length(assocCGIEPIC) head(assocCGIEPIC, 3) ## ----message = FALSE---------------------------------------------------------- class(annot450K) head(annot450K, 3) class(annotEPIC) head(annotEPIC, 3) ## ----------------------------------------------------------------------------- head(bandTable) ## ----sessionInfo, echo=FALSE-------------------------------------------------- sessionInfo()