mitoODEdata

Experimental data associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" (submitted).

Bioconductor version: Development (3.0)

This package contains the experimental data (assay annotation, siRNA annotation, time-lapse cell counts) associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" (submitted). The data ultimately come from the Mitocheck assay reported in "Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes" (Neumann, Walter et al, Nature 2010).

Author: Gregoire Pau

Maintainer: Gregoire Pau <pau.gregoire at gene.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("mitoODEdata")

To cite this package in a publication, start R and enter:

    citation("mitoODEdata")

Documentation

PDF R Script Mitoode data
PDF   Reference Manual
Text   NEWS

Details

biocViews CellBasedAssays, ExperimentData, Preprocessing, TimeCourse
Version 1.1.0
License LGPL
Depends R (>= 2.14.0)
Imports
Suggests
System Requirements
URL
Depends On Me mitoODE
Imports Me
Suggests Me

Package Downloads

Package Source mitoODEdata_1.1.0.tar.gz
Windows Binary mitoODEdata_1.1.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) mitoODEdata_1.1.0.tgz
Mac OS X 10.9 (Mavericks) mitoODEdata_1.1.0.tgz
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