ceu1kg

CEU (N=60) genotypes from 1000 genomes pilot phase I

Bioconductor version: Development (3.0)

CEU genotypes from 1000 genomes "low coverage" pilot phase I (approx 8 million SNP calls released July 2010); includes Wellcome trust GENEVAR expression for 43 indiv

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ceu1kg")

To cite this package in a publication, start R and enter:

    citation("ceu1kg")

Documentation

PDF R Script ceu1kg overview
PDF   Reference Manual

Details

biocViews ExperimentData, Genetics, SNP
Version 0.3.0
License Artistic-2.0
Depends R (>= 2.12.0), GGBase(>= 3.9.0), GGtools, Biobase
Imports
Suggests SNPlocs.Hsapiens.dbSNP.20101109
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source ceu1kg_0.3.0.tar.gz
Windows Binary ceu1kg_0.3.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) ceu1kg_0.3.0.tgz
Mac OS X 10.9 (Mavericks) ceu1kg_0.3.0.tgz
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