statTarget

DOI: 10.18129/B9.bioc.statTarget    

This is the development version of statTarget; for the stable release version, see statTarget.

Statistical Analysis of Molecular Profiles

Bioconductor version: Development (3.8)

A streamlined tool provides a graphical user interface for quality control based signal drift correction, integration of data from multi-batch MS-based experiments, and the comprehensive statistical analysis in metabolomics and proteomics.

Author: Hemi Luan

Maintainer: Hemi Luan <hemi.luan at gmail.com>

Citation (from within R, enter citation("statTarget")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("statTarget", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("statTarget")

 

HTML R Script statTarget 2.0
PDF   Reference Manual
Text   NEWS

Details

biocViews BatchEffect, DifferentialExpression, GUI, Machine Learning, MassSpectrometry, Metabolomics, MultipleComparison, Normalization, Preprocessing, Proteomics, QualityControl, Software, Visualization
Version 1.11.1
In Bioconductor since BioC 3.4 (R-3.3) (2 years)
License LGPL (>= 3)
Depends R (>= 3.3.0)
Imports randomForest, plyr, pdist, ROC, utils, grDevices, graphics, rrcov, stats, pls, impute
LinkingTo
Suggests testthat, BiocStyle, knitr, rmarkdown, gWidgets2, gWidgets2RGtk2, RGtk2
SystemRequirements
Enhances
URL https://stattarget.github.io
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package statTarget_1.11.1.tar.gz
Windows Binary statTarget_1.11.1.zip
Mac OS X 10.11 (El Capitan) statTarget_1.11.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/statTarget
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/statTarget
Package Short Url http://bioconductor.org/packages/statTarget/
Package Downloads Report Download Stats

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