To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRmine")

In most cases, you don't need to download the package archive at all.

miRmine

DOI: 10.18129/B9.bioc.miRmine    

This is the development version of miRmine; to use it, please install the devel version of Bioconductor.

Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment

Bioconductor version: Development (3.6)

miRmine database is a collection of expression profiles from different publicly available miRNA-seq datasets, Panwar et al (2017) miRmine: A Database of Human miRNA Expression, prepared with this data package as RangedSummarizedExperiment.

Author: Dusan Randjelovic [aut, cre]

Maintainer: Dusan Randjelovic <dusan.randjelovic at sbgenomics.com>

Citation (from within R, enter citation("miRmine")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRmine")

Documentation

HTML R Script miRmine
PDF   Reference Manual
Text   NEWS

Details

biocViews ExpressionData, Homo_sapiens_Data, RNASeqData, SequencingData, Software
Version 0.99.8
License GPL (>= 3)
Depends R (>= 3.4), SummarizedExperiment
Imports
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, DESeq2
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package miRmine_0.99.8.tar.gz
Windows Binary miRmine_0.99.8.zip
Mac OS X 10.11 (El Capitan) miRmine_0.99.8.tgz
Source Repository git clone https://git.bioconductor.org/packages/miRmine
Package Short Url http://bioconductor.org/packages/miRmine/
Package Downloads Report Download Stats

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