To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("focalCall")

In most cases, you don't need to download the package archive at all.

focalCall

DOI: 10.18129/B9.bioc.focalCall    

This is the development version of focalCall; for the stable release version, see focalCall.

Detection of focal aberrations in DNA copy number data

Bioconductor version: Development (3.6)

Detection of genomic focal aberrations in high-resolution DNA copy number data

Author: Oscar Krijgsman

Maintainer: Oscar Krijgsman <oscarkrijgsman at gmail.com>

Citation (from within R, enter citation("focalCall")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("focalCall")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("focalCall")

 

PDF R Script focalCall
PDF   Reference Manual
Text   NEWS

Details

biocViews Microarray, Preprocessing, Sequencing, Software, Visualization
Version 1.11.0
In Bioconductor since BioC 3.0 (R-3.1) (3 years)
License GPL-2
Depends R (>= 2.10.0), CGHcall
Imports
LinkingTo
Suggests RUnit, BiocGenerics
SystemRequirements
Enhances
URL https://github.com/OscarKrijgsman/focalCall
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package focalCall_1.11.0.tar.gz
Windows Binary focalCall_1.11.0.zip
Mac OS X 10.11 (El Capitan) focalCall_1.11.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/focalCall
Package Short Url http://bioconductor.org/packages/focalCall/
Package Downloads Report Download Stats

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