Registration and Call for Abstracts Open for Bioc2024

biodbLipidmaps

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This is the development version of biodbLipidmaps; for the stable release version, see biodbLipidmaps.

biodbLipidmaps, a library for connecting to the Lipidmaps Structure database


Bioconductor version: Development (3.19)

The biodbLipidmaps library provides access to the Lipidmaps Structure Database, using biodb package framework. It allows to retrieve entries by their accession number, and run web the services lmsdSearch and lmsdRecord.

Author: Pierrick Roger [aut, cre]

Maintainer: Pierrick Roger <pierrick.roger at cea.fr>

Citation (from within R, enter citation("biodbLipidmaps")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("biodbLipidmaps")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews DataImport, Infrastructure, Software
Version 1.9.1
In Bioconductor since BioC 3.14 (R-4.1) (2.5 years)
License AGPL-3
Depends R (>= 4.1)
Imports biodb(>= 1.3.2), lifecycle, R6
System Requirements
URL https://github.com/pkrog/biodbLipidmaps
Bug Reports https://github.com/pkrog/biodbLipidmaps/issues
See More
Suggests BiocStyle, lgr, roxygen2, devtools, testthat (>= 2.0.0), knitr, rmarkdown, covr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/biodbLipidmaps
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/biodbLipidmaps
Package Short Url https://bioconductor.org/packages/biodbLipidmaps/
Package Downloads Report Download Stats