• Home
• Bioconductor 3.24
• Software Packages
• SWATH2stats (development version)

SWATH2stats

This is the development version of SWATH2stats; for the stable release version, see SWATH2stats.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2

Transform and Filter SWATH Data for Statistical Packages

DOI: 10.18129/B9.bioc.SWATH2stats

Bioconductor version: Development (3.24)

This package is intended to transform SWATH data from the OpenSWATH software into a format readable by other statistics packages while performing filtering, annotation and FDR estimation.

Author: Peter Blattmann [aut, cre] Moritz Heusel [aut] Ruedi Aebersold [aut]

Maintainer: Peter Blattmann <peter_blattmann at bluewin.ch>

Citation (from within R, enter citation("SWATH2stats")):

Peter Blattmann Moritz Heusel Ruedi Aebersold. SWATH2stats: Transform and Filter SWATH Data for Statistical Packages. doi:10.18129/B9.bioc.SWATH2stats, R package version 1.43.0, https://bioconductor.org/packages/SWATH2stats.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("SWATH2stats")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SWATH2stats")

Details

Package Archives

Follow Installation instructions to use this package in your R session.