RchyOptimyx

Optimyzed Cellular Hierarchies for Flow Cytometry

Bioconductor version: Development (3.0)

Constructs a hierarchy of cells using flow cytometry for maximization of an external variable (e.g., a clinical outcome or a cytokine response).

Author: Adrin Jalali, Nima Aghaeepour

Maintainer: Adrin Jalali <adrin.jalali at gmail.com>, Nima Aghaeepour <naghaeep at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RchyOptimyx")

To cite this package in a publication, start R and enter:

    citation("RchyOptimyx")

Documentation

PDF R Script flowType package
PDF   Reference Manual
Text   NEWS

Details

biocViews FlowCytometry, Software
Version 2.5.0
In Bioconductor since BioC 2.10 (R-2.15)
License Artistic-2.0
Depends R (>= 2.10)
Imports Rgraphviz, sfsmisc, graphics, methods, graph, grDevices, flowType(>= 2.0.0)
Suggests flowCore
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source RchyOptimyx_2.5.0.tar.gz
Windows Binary RchyOptimyx_2.5.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RchyOptimyx_2.5.0.tgz
Mac OS X 10.9 (Mavericks)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center