DOI: 10.18129/B9.bioc.RNAither    

This is the development version of RNAither; for the stable release version, see RNAither.

Statistical analysis of high-throughput RNAi screens

Bioconductor version: Development (3.8)

RNAither analyzes cell-based RNAi screens, and includes quality assessment, customizable normalization and statistical tests, leading to lists of significant genes and biological processes.

Author: Nora Rieber and Lars Kaderali, University of Heidelberg, Viroquant Research Group Modeling, Im Neuenheimer Feld 267, 69120 Heidelberg, Germany

Maintainer: Lars Kaderali <lars.kaderali at uni-greifswald.de>

Citation (from within R, enter citation("RNAither")):


To install this package, start R and enter:

if (!require("BiocManager"))
BiocManager::install("RNAither", version = "devel")


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script RNAither, an automated pipeline for the statistical analysis of high-throughput RNAi screens
PDF   Reference Manual


biocViews Annotation, CellBasedAssays, GO, Preprocessing, QualityControl, Software, Visualization
Version 2.29.0
In Bioconductor since BioC 2.3 (R-2.8) (9.5 years)
License Artistic-2.0
Depends R (>= 2.10), topGO, RankProd, prada
Imports geneplotter, limma, biomaRt, car, splots, methods
Depends On Me
Imports Me
Suggests Me
Build Report  

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Source Package RNAither_2.29.0.tar.gz
Windows Binary RNAither_2.29.0.zip
Mac OS X 10.11 (El Capitan) RNAither_2.29.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RNAither
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RNAither
Package Short Url http://bioconductor.org/packages/RNAither/
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