ProCoNA

DOI: 10.18129/B9.bioc.ProCoNA    

This is the development version of ProCoNA; for the stable release version, see ProCoNA.

Protein co-expression network analysis (ProCoNA).

Bioconductor version: Development (3.8)

Protein co-expression network construction using peptide level data, with statisical analysis. (Journal of Clinical Bioinformatics 2013, 3:11 doi:10.1186/2043-9113-3-11)

Author: David L Gibbs

Maintainer: David L Gibbs <gibbsd at ohsu.edu>

Citation (from within R, enter citation("ProCoNA")):

Installation

To install this package, start R and enter:

if (!require("BiocManager"))
    install.packages("BiocManager")
BiocManager::install("ProCoNA", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ProCoNA")

 

PDF R Script De Novo Peptide Network Example
PDF   Reference Manual
Text   README
Text   NEWS

Details

biocViews GraphAndNetwork, Proteomics, Software
Version 1.19.0
In Bioconductor since BioC 2.13 (R-3.0) (5 years)
License GPL (>= 2)
Depends R (>= 2.10), methods, WGCNA, MSnbase, flashClust
Imports BiocGenerics, GOstats
LinkingTo
Suggests RUnit
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ProCoNA_1.19.0.tar.gz
Windows Binary ProCoNA_1.19.0.zip
Mac OS X 10.11 (El Capitan) ProCoNA_1.19.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ProCoNA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ProCoNA
Package Short Url http://bioconductor.org/packages/ProCoNA/
Package Downloads Report Download Stats

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