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## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Onassis")

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Onassis

DOI: 10.18129/B9.bioc.Onassis    

This is the development version of Onassis; for the stable release version, see Onassis.

OnASSIs Ontology Annotation and Semantic SImilarity software

Bioconductor version: Development (3.7)

A package that allows the annotation of text with ontology terms (mainly from OBO ontologies) and the computation of semantic similarity measures based on the structure of the ontology between different annotated samples.

Author: Eugenia Galeota

Maintainer: Eugenia Galeota <eugenia.galeota at gmail.com>

Citation (from within R, enter citation("Onassis")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Onassis")

Documentation

HTML R Script Onassis: Ontology Annotation and Semantic Similarity software
PDF   Reference Manual
Text   NEWS

Details

biocViews Annotation, Clustering, DataImport, GeneTarget, Network, Software
Version 1.1.0
License GPL-2
Depends R (>= 3.4), rJava, OnassisJavaLibs
Imports GEOmetadb, RSQLite, SRAdb, data.table, methods, tools, utils, AnnotationDbi
LinkingTo
Suggests BiocStyle, rmarkdown, knitr, htmltools, DT, org.Hs.eg.db, gplots, GenomicRanges
SystemRequirements Java (>= 1.8)
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Onassis_1.1.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/Onassis
Package Short Url http://bioconductor.org/packages/Onassis/
Package Downloads Report Download Stats

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