DOI: 10.18129/B9.bioc.GISPA    

This is the development version of GISPA; for the stable release version, see GISPA.

GISPA: Method for Gene Integrated Set Profile Analysis

Bioconductor version: Development (3.7)

GISPA is a method intended for the researchers who are interested in defining gene sets with similar, a priori specified molecular profile. GISPA method has been previously published in Nucleic Acid Research (Kowalski et al., 2016; PMID: 26826710).

Author: Bhakti Dwivedi and Jeanne Kowalski

Maintainer: Bhakti Dwivedi <bhakti.dwivedi at>

Citation (from within R, enter citation("GISPA")):


To install this package, start R and enter:

## try http:// if https:// URLs are not supported


HTML R Script GISPA:Method for Gene Integrated Set Profile Analysis
PDF   Reference Manual
Text   NEWS


biocViews GeneSetEnrichment, GenomeWideAssociation, Software, StatisticalMethod
Version 1.3.0
In Bioconductor since BioC 3.5 (R-3.4) (1 year)
License GPL-2
Depends R (>= 3.3.2)
Imports Biobase, changepoint, data.table, genefilter, graphics, GSEABase, HH, lattice, latticeExtra, plyr, scatterplot3d, stats
Suggests knitr
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GISPA_1.3.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan) GISPA_1.3.0.tgz
Source Repository git clone
Package Short Url
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: