BiocDockerManager

DOI: 10.18129/B9.bioc.BiocDockerManager    

This is the development version of BiocDockerManager; for the stable release version, see BiocDockerManager.

Access Bioconductor docker images

Bioconductor version: Development (3.12)

Package works analogous to BiocManager but for docker images. Use the BiocDockerManager package to install and manage docker images provided by the Bioconductor project. A convenient package to install images, update images and find which Bioconductor based docker images are available.

Author: Maintainer [aut, cre], Nitesh Turaga [aut]

Maintainer: Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BiocDockerManager")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BiocDockerManager")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocDockerManager")

 

HTML R Script BiocDockerManager Vignette
PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Software, ThirdPartyClient
Version 1.1.2
In Bioconductor since BioC 3.11 (R-4.0) (< 6 months)
License Artistic-2.0
Depends R (>= 4.0)
Imports httr, whisker, readr, dplyr, utils, methods
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, testthat (>= 2.1.0)
SystemRequirements docker
Enhances
URL
BugReports https://github.com/nturaga/BiocDockerManager/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BiocDockerManager_1.1.2.tar.gz
Windows Binary BiocDockerManager_1.1.2.zip
macOS 10.13 (High Sierra) BiocDockerManager_1.1.2.tgz
Source Repository git clone https://git.bioconductor.org/packages/BiocDockerManager
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BiocDockerManager
Package Short Url https://bioconductor.org/packages/BiocDockerManager/
Package Downloads Report Download Stats

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