DelayedDataFrame
Delayed operation on DataFrame using standard DataFrame metaphor
Bioconductor version: 3.23 · Package version: 1.28.0
Based on the standard DataFrame metaphor, we are trying to implement the feature of delayed operation on the DelayedDataFrame, with a slot of lazyIndex, which saves the mapping indexes for each column of DelayedDataFrame. Methods like show, validity check, [/[[ subsetting, rbind/cbind are implemented for DelayedDataFrame to be operated around lazyIndex. The listData slot stays untouched until a realization call e.g., DataFrame constructor OR as.list() is invoked.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DelayedDataFrame") Details
| Maintainer | Qian Liu <Qian.Liu@roswellpark.org> |
| Author | Qian Liu [aut, cre], Hervé Pagès [aut], Martin Morgan [aut] |
| License | GPL-3 |
| URL | https://github.com/Bioconductor/DelayedDataFrame |
| Bug Reports | https://github.com/Bioconductor/DelayedDataFrame/issues |
| Downloads rank | 317 |
| Source branch | RELEASE_3_23 |
| biocViews | DataRepresentation, Infrastructure, Software |
Documentation
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Dependencies
Depends: R (>= 3.6), S4Vectors (>= 0.23.19), DelayedArray (>= 0.7.5)
Imports: methods, stats, BiocGenerics
Suggests: testthat, knitr, rmarkdown, BiocStyle, SeqArray, GDSArray
Reverse dependencies
Imports Me (1): VariantExperiment