QUALIFIER

DOI: 10.18129/B9.bioc.QUALIFIER    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This is the development version of QUALIFIER; for the stable release version, see QUALIFIER.

Quality Control of Gated Flow Cytometry Experiments

Bioconductor version: Development (3.11)

Provides quality control and quality assessment tools for gated flow cytometry data.

Author: Mike Jiang,Greg Finak,Raphael Gottardo

Maintainer: Mike Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("QUALIFIER")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("QUALIFIER")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software
Version 1.31.1
In Bioconductor since BioC 2.10 (R-2.15) (7.5 years)
License Artistic-2.0
Depends R (>= 2.14.0), flowCore, flowViz, ncdfFlow, flowWorkspace, data.table, reshape
Imports MASS, hwriter, lattice, stats4, flowCore, flowViz, methods, flowWorkspace, latticeExtra, grDevices, tools, Biobase, XML, grid
LinkingTo
Suggests RSVGTipsDevice, knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/QUALIFIER
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/QUALIFIER
Package Short Url https://bioconductor.org/packages/QUALIFIER/
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